Freiburg RNA tools: a central online resource for RNA-focused research and teaching.

First Authors Martin Raden
Authors Martin Raden, Syed M Ali, Omer S Alkhnbashi, Anke Busch, Fabrizio Costa, Jason A Davis, Florian Eggenhofer, Rick Gelhausen, Jens Georg, Steffen Heyne, Michael Hiller, Kousik Kundu, Robert Kleinkauf, Steffen C Lott, Mostafa M Mohamed, Alexander Mattheis, Milad Miladi, Andreas S Richter, Sebastian Will, Joachim Wolff, Patrick R Wright, Rolf Backofen
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Last Authors Rolf Backofen
Journal Name Nucleic acids research (Nucleic Acids Res)
Volume 46
Issue W1
Page Range 25-29
Open Access true
Print Publication Date 2018-07-02
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Abstract The Freiburg RNA tools webserver is a well established online resource for RNA-focused research. It provides a unified user interface and comprehensive result visualization for efficient command line tools. The webserver includes RNA-RNA interaction prediction (IntaRNA, CopraRNA, metaMIR), sRNA homology search (GLASSgo), sequence-structure alignments (LocARNA, MARNA, CARNA, ExpaRNA), CRISPR repeat classification (CRISPRmap), sequence design (antaRNA, INFO-RNA, SECISDesign), structure aberration evaluation of point mutations (RaSE), and RNA/protein-family models visualization (CMV), and other methods. Open education resources offer interactive visualizations of RNA structure and RNA-RNA interaction prediction as well as basic and advanced sequence alignment algorithms. The services are freely available at http://rna.informatik.uni-freiburg.de.
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Publication Status Published
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DOI 10.1093/nar/gky329
PubMed ID 29788132
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Created By thuem
Added Date 2018-06-06
Last Edited By thuem
Last Edited Date 2018-07-18 13:59:08.85
Library ID 7140
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