Quantitative phase microscopy enables precise and efficient determination of biomolecular condensate composition.

First Authors Patrick M McCall
Authors Patrick M McCall, Kyoohyun Kim, Anatol W Fritsch, Juan M Iglesias-Artola, Louise Jawerth, Jie Wang, Martine Ruer, Jan Peychl, Andrey Poznyakovskiy, Jochen Guck, Simon Alberti, Anthony A. Hyman, Jan Brugues
Corresponding Authors
Last Authors Jan Brugues
Journal Name bioRxiv (bioRxiv)
Volume
Issue
Article Number https://doi.org/10.1101/2020.10.25.352823
Open Access true
Print Publication Date
Online Publication Date 2020-10-25
Abstract Many compartments in eukaryotic cells are protein-rich biomolecular condensates demixed from the cyto- or nucleoplasm. Although much has been learned in recent years about the integral roles condensates play in many cellular processes as well as the biophysical properties of reconstituted condensates, an understanding of their most basic feature, their composition, remains elusive. Here we combined quantitative phase microscopy (QPM) and the physics of sessile droplets to develop a precise method to measure the shape and composition of individual model condensates. This technique does not rely on fluorescent dyes or tags, which we show can significantly alter protein phase behavior, and requires 1000-fold less material than traditional label-free technologies. We further show that this QPM method measures the protein concentration in condensates to a 3-fold higher precision than the next best label-free approach, and that commonly employed strategies based on fluorescence intensity dramatically underestimate these concentrations by as much as 50-fold. Interestingly, we find that condensed-phase protein concentrations can span a broad range, with PGL3, TAF15(RBD) and FUS condensates falling between 80 and 500 mg/ml under typical in vitro conditions. This points to a natural diversity in condensate composition specified by protein sequence. We were also able to measure temperature-dependent phase equilibria with QPM, an essential step towards relating phase behavior to the underlying physics and chemistry. Finally, time-resolved QPM reveals that PGL3 condensates undergo a contraction-like process during aging which leads to doubling of the internal protein concentration coupled to condensate shrinkage. We anticipate that this new approach will enable understanding the physical properties of biomolecular condensates and their function.
Cover Image
Affiliated With Brugues, CSBD
Selected By
Acknowledged Services
Publication Status Published
Edoc Link
Sfx Link
DOI 10.1101/2020.10.25.352823
PubMed ID
WebOfScience Link
Alternative Full Text URL
Display Publisher Download Only false
Visible On MPI-CBG Website true
PDF Downloadable true
Created By herbst
Added Date 2020-10-28
Last Edited By herbst
Last Edited Date 2022-02-18 15:27:17.734
Library ID 7835
Document ID
Entry Complete true
eDoc Compliant false
Include in Edoc Report false
In Pure false
Ready for eDoc Export false
Author Affiliations Complete false
Project Name
Project URL
Grant ID
Funding Programme
Funding Organisation