SARS-CoV-2 nucleocapsid protein directly prevents cGAS-DNA recognition through competitive binding.

First Authors Theresia Gutmann, David Kuster
Authors Theresia Gutmann, David Kuster, Anthony Hyman
Corresponding Authors Theresia Gutmann, Anthony Hyman
Last Authors Anthony Hyman
Journal Name Proceedings of the National Academy of Sciences of the United States of America (Proc Natl Acad Sci U.S.A.)
Volume 122
Issue 26
Article Number doi: 10.1073/pnas.2426204122
Open Access true
Print Publication Date 2025-07-01
Online Publication Date 2025-07-01
Abstract A hallmark of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is the delayed interferon response. Interferons are typically produced upon host recognition of pathogen- or damage-associated molecular patterns, such as nucleic acids. While the mechanisms by which SARS-CoV-2 evades host recognition of its RNA are well studied, how it evades immune responses to cytosolic DNA-leaked from mitochondria or nuclei during infection-remains poorly understood. Here, we demonstrate that the SARS-CoV-2 nucleocapsid protein directly suppresses DNA sensing by cyclic guanosine monophosphate-adenosine monophosphate synthase (cGAS). Although primarily known for packaging the viral RNA genome, we uncover that the SARS-CoV-2 nucleocapsid protein also binds DNA with high affinity and competitively blocks cGAS activation. Using cell-free biochemical and biophysical approaches, including single-molecule optical tweezers, we show that the nucleocapsid protein binds to DNA at nanomolar concentrations and cocondenses with DNA at micromolar concentrations, thereby impeding stable cGAS-DNA interactions required for signal propagation. Hyperphosphorylation of the nucleocapsid protein diminishes its competitive binding capacity. Our findings reveal an unexpected role of the SARS-CoV-2 nucleocapsid protein in directly suppressing the cGAS-STING pathway, strongly suggesting that this contributes to the delayed interferon response during infection. This study raises the possibility that nucleocapsid proteins of other RNA viruses may also exhibit moonlighting functions by antagonizing host nucleic acid-sensing pathways.
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Affiliated With Hyman, Postdoc first author, Postdoc first female, Postdocs, Predoc first author, Predoc first male
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Acknowledged Services Biophysics Core Facility, Protein Expression, Light Microscopy Facility, Scientific Infrastructure
Publication Status Published
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DOI 10.1073/pnas.2426204122
PubMed ID 40549905
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Created By thuem
Added Date 2025-06-25
Last Edited By thuem
Last Edited Date 2025-06-26 09:15:36.46
Library ID 9017
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